Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHB4P54760 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB4P54760 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHB4P54760 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB4P54760 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB4P54760 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
EPHB4P54760 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB4P54760 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB4P54760 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHB4P54760 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB4P54760 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB4P54760 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHB4P54760 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHB4P54760 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.62■□□□□ 0.41
EPHB4P54760 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
EPHB4P54760 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
EPHB4P54760 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHB4P54760 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHB4P54760 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHB4P54760 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHB4P54760 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHB4P54760 AL139010.1-201ENST00000454878 894 ntBASIC17.62■□□□□ 0.41
EPHB4P54760 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
EPHB4P54760 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.62■□□□□ 0.41
EPHB4P54760 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.62■□□□□ 0.41
EPHB4P54760 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHB4P54760 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.62■□□□□ 0.41
EPHB4P54760 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.62■□□□□ 0.41
EPHB4P54760 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHB4P54760 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
EPHB4P54760 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
EPHB4P54760 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHB4P54760 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHB4P54760 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
EPHB4P54760 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 AL603832.2-201ENST00000566195 2125 ntBASIC17.62■□□□□ 0.41
EPHB4P54760 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHB4P54760 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB4P54760 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.61■□□□□ 0.41
EPHB4P54760 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.61■□□□□ 0.41
EPHB4P54760 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 AL596087.1-201ENST00000400979 1969 ntBASIC17.61■□□□□ 0.41
EPHB4P54760 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.61■□□□□ 0.41
EPHB4P54760 PFN1P12-201ENST00000455938 534 ntBASIC17.61■□□□□ 0.41
EPHB4P54760 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.61■□□□□ 0.41
EPHB4P54760 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHB4P54760 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EPHB4P54760 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHB4P54760 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EPHB4P54760 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.61■□□□□ 0.41
EPHB4P54760 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHB4P54760 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.61■□□□□ 0.41
EPHB4P54760 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHB4P54760 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
EPHB4P54760 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
EPHB4P54760 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHB4P54760 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EPHB4P54760 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHB4P54760 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
EPHB4P54760 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
EPHB4P54760 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB4P54760 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB4P54760 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB4P54760 AL162726.2-201ENST00000438986 1017 ntBASIC17.6■□□□□ 0.41
EPHB4P54760 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB4P54760 AP000812.2-201ENST00000538934 718 ntBASIC17.6■□□□□ 0.41
EPHB4P54760 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms