Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.22■□□□□ 0.35
PMS1P54277 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.22■□□□□ 0.35
PMS1P54277 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.22■□□□□ 0.35
PMS1P54277 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.22■□□□□ 0.35
PMS1P54277 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.22■□□□□ 0.35
PMS1P54277 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.22■□□□□ 0.35
PMS1P54277 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PMS1P54277 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PMS1P54277 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.22■□□□□ 0.35
PMS1P54277 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PMS1P54277 AJ011931.1-201ENST00000618749 2492 ntBASIC17.22■□□□□ 0.35
PMS1P54277 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
PMS1P54277 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.21■□□□□ 0.35
PMS1P54277 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PMS1P54277 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PMS1P54277 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.21■□□□□ 0.35
PMS1P54277 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.21■□□□□ 0.35
PMS1P54277 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.21■□□□□ 0.35
PMS1P54277 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
PMS1P54277 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PMS1P54277 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PMS1P54277 MROH4P-201ENST00000431302 1578 ntBASIC17.21■□□□□ 0.35
PMS1P54277 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PMS1P54277 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 FO538757.1-201ENST00000623083 1397 ntBASIC17.21■□□□□ 0.35
PMS1P54277 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.21■□□□□ 0.35
PMS1P54277 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.21■□□□□ 0.35
PMS1P54277 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.21■□□□□ 0.35
PMS1P54277 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.21■□□□□ 0.35
PMS1P54277 HLA-V-204ENST00000476601 1289 ntBASIC17.21■□□□□ 0.35
PMS1P54277 SLED1-202ENST00000512051 380 ntBASIC17.21■□□□□ 0.35
PMS1P54277 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 AC010336.2-201ENST00000564226 506 ntBASIC17.21■□□□□ 0.35
PMS1P54277 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.21■□□□□ 0.35
PMS1P54277 MIR6069-201ENST00000620069 79 ntBASIC17.21■□□□□ 0.35
PMS1P54277 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PMS1P54277 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PMS1P54277 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PMS1P54277 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
PMS1P54277 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PMS1P54277 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PMS1P54277 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PMS1P54277 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
PMS1P54277 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PMS1P54277 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.2■□□□□ 0.34
PMS1P54277 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.2■□□□□ 0.34
PMS1P54277 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.2■□□□□ 0.34
PMS1P54277 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.2■□□□□ 0.34
PMS1P54277 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.2■□□□□ 0.34
PMS1P54277 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.2■□□□□ 0.34
PMS1P54277 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.2■□□□□ 0.34
PMS1P54277 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 TUBB3P1-201ENST00000405796 1332 ntBASIC17.2■□□□□ 0.34
PMS1P54277 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.2■□□□□ 0.34
PMS1P54277 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMS1P54277 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms