Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 CICP1-201ENST00000416803 2410 ntBASIC13.32□□□□□ -0.28
NKX2-5P52952 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 MIR193BHG-211ENST00000641433 5365 ntBASIC13.32□□□□□ -0.28
NKX2-5P52952 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-5P52952 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX2-5P52952 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-5P52952 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.32□□□□□ -0.28
NKX2-5P52952 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-5P52952 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX2-5P52952 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 NCF1B-203ENST00000435988 1254 ntBASIC13.32□□□□□ -0.28
NKX2-5P52952 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
NKX2-5P52952 NUDT16P1-203ENST00000513809 620 ntBASIC13.32□□□□□ -0.28
NKX2-5P52952 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX2-5P52952 AC098934.4-201ENST00000564127 592 ntBASIC13.32□□□□□ -0.28
NKX2-5P52952 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 MIR4492-201ENST00000581627 80 ntBASIC13.32□□□□□ -0.28
NKX2-5P52952 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.32□□□□□ -0.28
NKX2-5P52952 AL023803.3-201ENST00000615559 522 ntBASIC13.32□□□□□ -0.28
NKX2-5P52952 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-5P52952 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 AL031595.1-201ENST00000623969 4709 ntBASIC13.31□□□□□ -0.28
NKX2-5P52952 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-5P52952 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-5P52952 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-5P52952 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-5P52952 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-5P52952 AL353593.2-201ENST00000602529 1483 ntBASIC13.31□□□□□ -0.28
NKX2-5P52952 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms