Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HMGA2P52926 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.28□□□□□ -0.12
HMGA2P52926 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.28□□□□□ -0.12
HMGA2P52926 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGA2P52926 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGA2P52926 FAM197Y3-203ENST00000618346 717 ntBASIC14.28□□□□□ -0.12
HMGA2P52926 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
HMGA2P52926 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGA2P52926 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HMGA2P52926 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGA2P52926 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
HMGA2P52926 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGA2P52926 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGA2P52926 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGA2P52926 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGA2P52926 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGA2P52926 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGA2P52926 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
HMGA2P52926 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGA2P52926 ZNF259P1-201ENST00000407656 1365 ntBASIC14.27□□□□□ -0.12
HMGA2P52926 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGA2P52926 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGA2P52926 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGA2P52926 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGA2P52926 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HMGA2P52926 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HMGA2P52926 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGA2P52926 AC104457.1-201ENST00000401024 814 ntBASIC14.27□□□□□ -0.13
HMGA2P52926 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HMGA2P52926 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGA2P52926 FAM58CP-201ENST00000435741 640 ntBASIC14.27□□□□□ -0.13
HMGA2P52926 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGA2P52926 KRT18P3-201ENST00000451602 1288 ntBASIC14.27□□□□□ -0.13
HMGA2P52926 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGA2P52926 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGA2P52926 SLC25A39P2-201ENST00000537614 270 ntBASIC14.27□□□□□ -0.13
HMGA2P52926 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGA2P52926 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.27□□□□□ -0.13
HMGA2P52926 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGA2P52926 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.27□□□□□ -0.13
HMGA2P52926 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGA2P52926 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGA2P52926 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGA2P52926 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGA2P52926 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGA2P52926 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGA2P52926 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGA2P52926 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HMGA2P52926 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGA2P52926 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
HMGA2P52926 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGA2P52926 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HMGA2P52926 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
HMGA2P52926 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HMGA2P52926 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HMGA2P52926 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGA2P52926 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HMGA2P52926 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGA2P52926 IL9RP2-201ENST00000423948 1312 ntBASIC14.26□□□□□ -0.13
HMGA2P52926 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HMGA2P52926 BX640514.1-201ENST00000583223 1918 ntBASIC14.26□□□□□ -0.13
HMGA2P52926 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HMGA2P52926 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGA2P52926 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGA2P52926 TARDBPP1-201ENST00000442013 1203 ntBASIC14.26□□□□□ -0.13
HMGA2P52926 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.26□□□□□ -0.13
HMGA2P52926 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.26□□□□□ -0.13
HMGA2P52926 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms