Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A2P52657 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.83■□□□□ 0.44
GTF2A2P52657 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.83■□□□□ 0.44
GTF2A2P52657 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A2P52657 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 AC020916.1-201ENST00000587762 1774 ntBASIC17.82■□□□□ 0.44
GTF2A2P52657 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.82■□□□□ 0.44
GTF2A2P52657 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.82■□□□□ 0.44
GTF2A2P52657 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.82■□□□□ 0.44
GTF2A2P52657 POM121L8P-201ENST00000417732 1281 ntBASIC17.82■□□□□ 0.44
GTF2A2P52657 POM121L9P-203ENST00000441984 1285 ntBASIC17.82■□□□□ 0.44
GTF2A2P52657 HIST2H2BB-201ENST00000449108 381 ntBASIC17.82■□□□□ 0.44
GTF2A2P52657 EEF1DP6-201ENST00000449232 372 ntBASIC17.82■□□□□ 0.44
GTF2A2P52657 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.82■□□□□ 0.44
GTF2A2P52657 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.82■□□□□ 0.44
GTF2A2P52657 AC021723.1-201ENST00000486306 515 ntBASIC17.82■□□□□ 0.44
GTF2A2P52657 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.82■□□□□ 0.44
GTF2A2P52657 AC024681.1-201ENST00000521917 487 ntBASIC17.82■□□□□ 0.44
GTF2A2P52657 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.82■□□□□ 0.44
GTF2A2P52657 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.82■□□□□ 0.44
GTF2A2P52657 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
GTF2A2P52657 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.82■□□□□ 0.44
GTF2A2P52657 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.82■□□□□ 0.44
GTF2A2P52657 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GTF2A2P52657 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GTF2A2P52657 AC007787.1-201ENST00000588095 1583 ntBASIC17.82■□□□□ 0.44
GTF2A2P52657 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
GTF2A2P52657 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GTF2A2P52657 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A2P52657 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A2P52657 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 KRT8P29-201ENST00000420409 1371 ntBASIC17.81■□□□□ 0.44
GTF2A2P52657 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 CHMP1AP1-201ENST00000445563 662 ntBASIC17.81■□□□□ 0.44
GTF2A2P52657 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.81■□□□□ 0.44
GTF2A2P52657 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.81■□□□□ 0.44
GTF2A2P52657 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 AC100850.1-201ENST00000506768 649 ntBASIC17.81■□□□□ 0.44
GTF2A2P52657 AL391280.1-201ENST00000506969 1062 ntBASIC17.81■□□□□ 0.44
GTF2A2P52657 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.81■□□□□ 0.44
GTF2A2P52657 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
GTF2A2P52657 RN7SL574P-201ENST00000581512 297 ntBASIC17.81■□□□□ 0.44
GTF2A2P52657 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 AC099398.1-201ENST00000567919 2776 ntBASIC17.81■□□□□ 0.44
GTF2A2P52657 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.81■□□□□ 0.44
GTF2A2P52657 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A2P52657 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
GTF2A2P52657 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GTF2A2P52657 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GTF2A2P52657 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
GTF2A2P52657 AC008132.1-202ENST00000342005 1389 ntBASIC17.8■□□□□ 0.44
GTF2A2P52657 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms