Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 AC004898.1-201ENST00000451057 766 ntBASIC13.54□□□□□ -0.24
HCFC1P51610 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.54□□□□□ -0.24
HCFC1P51610 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.54□□□□□ -0.24
HCFC1P51610 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.54□□□□□ -0.24
HCFC1P51610 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.54□□□□□ -0.24
HCFC1P51610 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
HCFC1P51610 AC091271.1-201ENST00000611877 1162 ntBASIC13.54□□□□□ -0.24
HCFC1P51610 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 AC006453.4-201ENST00000636949 1252 ntBASIC13.54□□□□□ -0.24
HCFC1P51610 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
HCFC1P51610 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 AL354989.2-201ENST00000435838 1540 ntBASIC13.53□□□□□ -0.24
HCFC1P51610 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HCFC1P51610 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
HCFC1P51610 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.53□□□□□ -0.24
HCFC1P51610 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
HCFC1P51610 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.53□□□□□ -0.24
HCFC1P51610 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HCFC1P51610 SLC25A24P2-201ENST00000415059 510 ntBASIC13.53□□□□□ -0.24
HCFC1P51610 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.53□□□□□ -0.24
HCFC1P51610 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.53□□□□□ -0.24
HCFC1P51610 EIF4HP1-201ENST00000453115 687 ntBASIC13.53□□□□□ -0.24
HCFC1P51610 AKR7A2P1-201ENST00000460134 915 ntBASIC13.53□□□□□ -0.24
HCFC1P51610 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.53□□□□□ -0.24
HCFC1P51610 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.53□□□□□ -0.24
HCFC1P51610 CHMP4BP1-201ENST00000556017 588 ntBASIC13.53□□□□□ -0.24
HCFC1P51610 AC105129.2-201ENST00000559536 390 ntBASIC13.53□□□□□ -0.24
HCFC1P51610 AL096828.3-201ENST00000615354 462 ntBASIC13.53□□□□□ -0.24
HCFC1P51610 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.53□□□□□ -0.24
HCFC1P51610 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.53□□□□□ -0.24
HCFC1P51610 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.53□□□□□ -0.24
HCFC1P51610 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HCFC1P51610 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.53□□□□□ -0.24
HCFC1P51610 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
HCFC1P51610 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.53□□□□□ -0.24
HCFC1P51610 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.53□□□□□ -0.24
HCFC1P51610 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.53□□□□□ -0.24
HCFC1P51610 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HCFC1P51610 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.53□□□□□ -0.24
HCFC1P51610 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HCFC1P51610 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HCFC1P51610 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.52□□□□□ -0.24
HCFC1P51610 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
HCFC1P51610 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
HCFC1P51610 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.52□□□□□ -0.24
HCFC1P51610 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.52□□□□□ -0.24
HCFC1P51610 Z93015.1-201ENST00000451718 390 ntBASIC13.52□□□□□ -0.24
HCFC1P51610 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.52□□□□□ -0.24
HCFC1P51610 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.52□□□□□ -0.24
HCFC1P51610 AP003171.2-201ENST00000528208 925 ntBASIC13.52□□□□□ -0.24
HCFC1P51610 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.52□□□□□ -0.24
HCFC1P51610 NDUFV2P1-201ENST00000596415 907 ntBASIC13.52□□□□□ -0.24
HCFC1P51610 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.52□□□□□ -0.24
HCFC1P51610 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
HCFC1P51610 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.52□□□□□ -0.24
HCFC1P51610 AC018892.3-201ENST00000623986 2499 ntBASIC13.52□□□□□ -0.24
HCFC1P51610 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HCFC1P51610 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
HCFC1P51610 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 AC006449.6-201ENST00000612330 2296 ntBASIC13.52□□□□□ -0.25
HCFC1P51610 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HCFC1P51610 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.52□□□□□ -0.25
HCFC1P51610 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.52□□□□□ -0.25
HCFC1P51610 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms