Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ASCL1P50553 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ASCL1P50553 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ASCL1P50553 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ASCL1P50553 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.98□□□□□ -0.17
ASCL1P50553 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ASCL1P50553 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ASCL1P50553 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.97□□□□□ -0.17
ASCL1P50553 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.97□□□□□ -0.17
ASCL1P50553 RPL13P2-201ENST00000440687 659 ntBASIC13.97□□□□□ -0.17
ASCL1P50553 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.97□□□□□ -0.17
ASCL1P50553 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.97□□□□□ -0.17
ASCL1P50553 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.97□□□□□ -0.17
ASCL1P50553 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.97□□□□□ -0.17
ASCL1P50553 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 AC133539.2-201ENST00000604757 467 ntBASIC13.97□□□□□ -0.17
ASCL1P50553 AL391069.4-201ENST00000609583 481 ntBASIC13.97□□□□□ -0.17
ASCL1P50553 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 AC133552.6-201ENST00000613406 534 ntBASIC13.97□□□□□ -0.17
ASCL1P50553 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.97□□□□□ -0.17
ASCL1P50553 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ASCL1P50553 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.97□□□□□ -0.17
ASCL1P50553 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ASCL1P50553 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ASCL1P50553 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ASCL1P50553 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.96□□□□□ -0.17
ASCL1P50553 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.96□□□□□ -0.17
ASCL1P50553 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ASCL1P50553 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
ASCL1P50553 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ASCL1P50553 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
ASCL1P50553 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ASCL1P50553 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.96□□□□□ -0.17
ASCL1P50553 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.96□□□□□ -0.17
ASCL1P50553 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.96□□□□□ -0.17
ASCL1P50553 KRT223P-202ENST00000449164 1292 ntBASIC13.96□□□□□ -0.17
ASCL1P50553 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.96□□□□□ -0.17
ASCL1P50553 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.96□□□□□ -0.17
ASCL1P50553 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.96□□□□□ -0.17
ASCL1P50553 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ASCL1P50553 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.96□□□□□ -0.17
ASCL1P50553 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.96□□□□□ -0.17
ASCL1P50553 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.96□□□□□ -0.17
ASCL1P50553 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms