Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.99□□□□□ -0.17
SRP9P49458 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 AC008267.7-201ENST00000624570 1194 ntBASIC13.99□□□□□ -0.17
SRP9P49458 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.99□□□□□ -0.17
SRP9P49458 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.99□□□□□ -0.17
SRP9P49458 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SRP9P49458 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.99□□□□□ -0.17
SRP9P49458 AL592424.1-201ENST00000563624 1536 ntBASIC13.99□□□□□ -0.17
SRP9P49458 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.99□□□□□ -0.17
SRP9P49458 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.99□□□□□ -0.17
SRP9P49458 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.99□□□□□ -0.17
SRP9P49458 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.99□□□□□ -0.17
SRP9P49458 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 AL390755.1-201ENST00000623716 2027 ntBASIC13.98□□□□□ -0.17
SRP9P49458 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SRP9P49458 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 PCDHA3-202ENST00000532566 4594 ntBASIC13.98□□□□□ -0.17
SRP9P49458 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 AC079140.1-201ENST00000508039 487 ntBASIC13.98□□□□□ -0.17
SRP9P49458 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
SRP9P49458 SNHG9-202ENST00000564014 471 ntBASIC13.98□□□□□ -0.17
SRP9P49458 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
SRP9P49458 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.98□□□□□ -0.17
SRP9P49458 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 AC013726.1-201ENST00000563747 2285 ntBASIC13.98□□□□□ -0.17
SRP9P49458 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.98□□□□□ -0.17
SRP9P49458 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRP9P49458 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.97□□□□□ -0.17
SRP9P49458 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.97□□□□□ -0.17
SRP9P49458 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.97□□□□□ -0.17
SRP9P49458 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 AC008677.1-201ENST00000519230 1561 ntBASIC13.97□□□□□ -0.17
SRP9P49458 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.97□□□□□ -0.17
SRP9P49458 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SRP9P49458 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 AC112693.3-201ENST00000624819 1983 ntBASIC13.97□□□□□ -0.17
SRP9P49458 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.97□□□□□ -0.17
SRP9P49458 AC254562.1-201ENST00000417586 456 ntBASIC13.97□□□□□ -0.17
SRP9P49458 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 AL592309.1-201ENST00000443127 649 ntBASIC13.97□□□□□ -0.17
SRP9P49458 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.97□□□□□ -0.17
SRP9P49458 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.97□□□□□ -0.17
SRP9P49458 AC105233.2-201ENST00000523697 349 ntBASIC13.97□□□□□ -0.17
SRP9P49458 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SRP9P49458 AF228730.5-201ENST00000530288 346 ntBASIC13.97□□□□□ -0.17
SRP9P49458 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms