Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.97□□□□□ -0.17
CSNK1A1P48729 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC136621.1-201ENST00000624017 2304 ntBASIC13.97□□□□□ -0.17
CSNK1A1P48729 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC087499.5-201ENST00000452760 1342 ntBASIC13.97□□□□□ -0.17
CSNK1A1P48729 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC097376.2-205ENST00000610159 5334 ntBASIC13.97□□□□□ -0.17
CSNK1A1P48729 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC241585.1-201ENST00000433527 519 ntBASIC13.97□□□□□ -0.17
CSNK1A1P48729 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 SLED1-202ENST00000512051 380 ntBASIC13.97□□□□□ -0.17
CSNK1A1P48729 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC010336.2-201ENST00000564226 506 ntBASIC13.97□□□□□ -0.17
CSNK1A1P48729 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC093512.1-201ENST00000617969 520 ntBASIC13.97□□□□□ -0.17
CSNK1A1P48729 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CSNK1A1P48729 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1A1P48729 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 SDHAP3-202ENST00000515467 728 ntBASIC13.96□□□□□ -0.17
CSNK1A1P48729 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 AC074044.1-201ENST00000609673 707 ntBASIC13.96□□□□□ -0.17
CSNK1A1P48729 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 AL390754.1-201ENST00000619088 582 ntBASIC13.96□□□□□ -0.17
CSNK1A1P48729 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSNK1A1P48729 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.96□□□□□ -0.17
CSNK1A1P48729 Z97205.2-201ENST00000564697 1639 ntBASIC13.96□□□□□ -0.17
CSNK1A1P48729 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms