Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TM4SF4P48230 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TM4SF4P48230 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.45■□□□□ 0.38
TM4SF4P48230 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.45■□□□□ 0.38
TM4SF4P48230 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 AL592076.1-201ENST00000424448 303 ntBASIC17.45■□□□□ 0.38
TM4SF4P48230 AC026320.2-201ENST00000434379 478 ntBASIC17.45■□□□□ 0.38
TM4SF4P48230 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.45■□□□□ 0.38
TM4SF4P48230 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.45■□□□□ 0.38
TM4SF4P48230 AC008723.1-201ENST00000506922 207 ntBASIC17.45■□□□□ 0.38
TM4SF4P48230 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.45■□□□□ 0.38
TM4SF4P48230 RPL17P45-201ENST00000586289 509 ntBASIC17.45■□□□□ 0.38
TM4SF4P48230 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.45■□□□□ 0.38
TM4SF4P48230 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.45■□□□□ 0.38
TM4SF4P48230 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.45■□□□□ 0.38
TM4SF4P48230 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TM4SF4P48230 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TM4SF4P48230 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF4P48230 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.44■□□□□ 0.38
TM4SF4P48230 CAP2P1-201ENST00000557743 1390 ntBASIC17.44■□□□□ 0.38
TM4SF4P48230 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TM4SF4P48230 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.44■□□□□ 0.38
TM4SF4P48230 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.44■□□□□ 0.38
TM4SF4P48230 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TM4SF4P48230 RBM8B-201ENST00000555532 525 ntBASIC17.44■□□□□ 0.38
TM4SF4P48230 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TM4SF4P48230 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TM4SF4P48230 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 AC005632.3-201ENST00000605544 308 ntBASIC17.44■□□□□ 0.38
TM4SF4P48230 MIR6858-201ENST00000620733 67 ntBASIC17.44■□□□□ 0.38
TM4SF4P48230 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.44■□□□□ 0.38
TM4SF4P48230 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.44■□□□□ 0.38
TM4SF4P48230 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TM4SF4P48230 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 AL512430.1-201ENST00000392575 860 ntBASIC17.43■□□□□ 0.38
TM4SF4P48230 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TM4SF4P48230 HLA-K-203ENST00000430151 1046 ntBASIC17.43■□□□□ 0.38
TM4SF4P48230 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.43■□□□□ 0.38
TM4SF4P48230 KLF2P1-201ENST00000447438 1042 ntBASIC17.43■□□□□ 0.38
TM4SF4P48230 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 AL022344.2-201ENST00000568976 968 ntBASIC17.43■□□□□ 0.38
TM4SF4P48230 MIR3677-201ENST00000578964 60 ntBASIC17.43■□□□□ 0.38
TM4SF4P48230 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.43■□□□□ 0.38
TM4SF4P48230 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 AC007881.3-201ENST00000608897 607 ntBASIC17.43■□□□□ 0.38
TM4SF4P48230 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.43■□□□□ 0.38
TM4SF4P48230 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.43■□□□□ 0.38
TM4SF4P48230 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.43■□□□□ 0.38
TM4SF4P48230 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.43■□□□□ 0.38
TM4SF4P48230 AL008718.2-201ENST00000609206 1313 ntBASIC17.43■□□□□ 0.38
TM4SF4P48230 KRT8P21-201ENST00000430398 1491 ntBASIC17.43■□□□□ 0.38
TM4SF4P48230 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 MBLAC2-202ENST00000514906 1936 ntBASIC17.43■□□□□ 0.38
TM4SF4P48230 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM4SF4P48230 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM4SF4P48230 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms