Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TNFSF9P41273 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFSF9P41273 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFSF9P41273 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.85■□□□□ 0.29
TNFSF9P41273 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFSF9P41273 RPL13AP25-201ENST00000484130 612 ntBASIC16.85■□□□□ 0.29
TNFSF9P41273 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.85■□□□□ 0.29
TNFSF9P41273 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
TNFSF9P41273 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFSF9P41273 CU634019.7-201ENST00000624153 1185 ntBASIC16.85■□□□□ 0.29
TNFSF9P41273 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 FP236241.2-201ENST00000624906 1185 ntBASIC16.85■□□□□ 0.29
TNFSF9P41273 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TNFSF9P41273 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.85■□□□□ 0.29
TNFSF9P41273 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TNFSF9P41273 KRT8P22-201ENST00000562317 1415 ntBASIC16.85■□□□□ 0.29
TNFSF9P41273 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFSF9P41273 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFSF9P41273 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.85■□□□□ 0.29
TNFSF9P41273 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFSF9P41273 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.85■□□□□ 0.29
TNFSF9P41273 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TNFSF9P41273 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 AC087481.3-201ENST00000602886 1894 ntBASIC16.84■□□□□ 0.29
TNFSF9P41273 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TNFSF9P41273 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFSF9P41273 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF9P41273 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFSF9P41273 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF9P41273 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF9P41273 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TNFSF9P41273 SOCS2P1-201ENST00000417727 557 ntBASIC16.84■□□□□ 0.29
TNFSF9P41273 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.84■□□□□ 0.29
TNFSF9P41273 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
TNFSF9P41273 KRT17P7-201ENST00000451704 1104 ntBASIC16.84■□□□□ 0.29
TNFSF9P41273 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF9P41273 AC011495.1-201ENST00000498085 584 ntBASIC16.84■□□□□ 0.29
TNFSF9P41273 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.84■□□□□ 0.29
TNFSF9P41273 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.84■□□□□ 0.29
TNFSF9P41273 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.84■□□□□ 0.29
TNFSF9P41273 AC010319.3-201ENST00000597028 470 ntBASIC16.84■□□□□ 0.29
TNFSF9P41273 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.84■□□□□ 0.29
TNFSF9P41273 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFSF9P41273 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TNFSF9P41273 AC063926.2-201ENST00000623766 1308 ntBASIC16.84■□□□□ 0.29
TNFSF9P41273 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF9P41273 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TNFSF9P41273 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFSF9P41273 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TNFSF9P41273 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TNFSF9P41273 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFSF9P41273 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFSF9P41273 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFSF9P41273 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
TNFSF9P41273 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFSF9P41273 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFSF9P41273 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFSF9P41273 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFSF9P41273 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms