Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HADHAP40939 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.9■□□□□ 0.14
HADHAP40939 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.89■□□□□ 0.13
HADHAP40939 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 FO538757.1-201ENST00000623083 1397 ntBASIC15.89■□□□□ 0.13
HADHAP40939 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.89■□□□□ 0.13
HADHAP40939 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HADHAP40939 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.89■□□□□ 0.13
HADHAP40939 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HADHAP40939 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.89■□□□□ 0.13
HADHAP40939 AZGP1P1-201ENST00000411909 902 ntBASIC15.89■□□□□ 0.13
HADHAP40939 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
HADHAP40939 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.89■□□□□ 0.13
HADHAP40939 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.89■□□□□ 0.13
HADHAP40939 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.89■□□□□ 0.13
HADHAP40939 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.89■□□□□ 0.13
HADHAP40939 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HADHAP40939 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HADHAP40939 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HADHAP40939 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HADHAP40939 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HADHAP40939 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.88■□□□□ 0.13
HADHAP40939 AC092127.1-201ENST00000567093 3455 ntBASIC15.88■□□□□ 0.13
HADHAP40939 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HADHAP40939 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
HADHAP40939 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
HADHAP40939 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HADHAP40939 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.88■□□□□ 0.13
HADHAP40939 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.88■□□□□ 0.13
HADHAP40939 AL080243.2-201ENST00000418783 582 ntBASIC15.88■□□□□ 0.13
HADHAP40939 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.88■□□□□ 0.13
HADHAP40939 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 CYMP-203ENST00000474680 1263 ntBASIC15.88■□□□□ 0.13
HADHAP40939 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.88■□□□□ 0.13
HADHAP40939 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.88■□□□□ 0.13
HADHAP40939 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.88■□□□□ 0.13
HADHAP40939 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.88■□□□□ 0.13
HADHAP40939 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.88■□□□□ 0.13
HADHAP40939 MIR4313-201ENST00000580760 101 ntBASIC15.88■□□□□ 0.13
HADHAP40939 AC073592.8-201ENST00000624126 511 ntBASIC15.88■□□□□ 0.13
HADHAP40939 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HADHAP40939 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.88■□□□□ 0.13
HADHAP40939 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HADHAP40939 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HADHAP40939 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.87■□□□□ 0.13
HADHAP40939 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HADHAP40939 AC112693.3-201ENST00000624819 1983 ntBASIC15.87■□□□□ 0.13
HADHAP40939 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HADHAP40939 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HADHAP40939 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HADHAP40939 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.87■□□□□ 0.13
HADHAP40939 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HADHAP40939 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HADHAP40939 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.87■□□□□ 0.13
HADHAP40939 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HADHAP40939 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HADHAP40939 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HADHAP40939 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.87■□□□□ 0.13
HADHAP40939 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HADHAP40939 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms