Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.54■□□□□ 0.24
RFC1P35251 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC1P35251 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFC1P35251 TREML5P-201ENST00000421694 576 ntBASIC16.54■□□□□ 0.24
RFC1P35251 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.54■□□□□ 0.24
RFC1P35251 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.54■□□□□ 0.24
RFC1P35251 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.54■□□□□ 0.24
RFC1P35251 DUX4L27-201ENST00000554796 1261 ntBASIC16.54■□□□□ 0.24
RFC1P35251 AC010336.2-201ENST00000564226 506 ntBASIC16.54■□□□□ 0.24
RFC1P35251 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.54■□□□□ 0.24
RFC1P35251 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.54■□□□□ 0.24
RFC1P35251 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.54■□□□□ 0.24
RFC1P35251 Z97205.2-201ENST00000564697 1639 ntBASIC16.54■□□□□ 0.24
RFC1P35251 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFC1P35251 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RFC1P35251 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC1P35251 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 C18orf15-201ENST00000623680 2534 ntBASIC16.53■□□□□ 0.24
RFC1P35251 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC1P35251 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 AC138035.3-201ENST00000622706 2791 ntBASIC16.53■□□□□ 0.24
RFC1P35251 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 AL161772.1-201ENST00000610494 4412 ntBASIC16.53■□□□□ 0.24
RFC1P35251 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.53■□□□□ 0.24
RFC1P35251 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.53■□□□□ 0.24
RFC1P35251 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.53■□□□□ 0.24
RFC1P35251 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.53■□□□□ 0.24
RFC1P35251 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC1P35251 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC1P35251 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC1P35251 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC1P35251 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.53■□□□□ 0.24
RFC1P35251 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
RFC1P35251 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC1P35251 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC1P35251 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC1P35251 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 AL109954.1-202ENST00000564051 2148 ntBASIC16.52■□□□□ 0.24
RFC1P35251 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RFC1P35251 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC1P35251 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC1P35251 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC1P35251 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RFC1P35251 MIR943-201ENST00000401286 94 ntBASIC16.52■□□□□ 0.24
RFC1P35251 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.52■□□□□ 0.24
RFC1P35251 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.52■□□□□ 0.24
RFC1P35251 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC1P35251 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC1P35251 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC1P35251 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms