Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-FP30511 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-FP30511 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-FP30511 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HLA-FP30511 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.81■□□□□ 0.12
HLA-FP30511 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
HLA-FP30511 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-FP30511 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HLA-FP30511 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-FP30511 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.81■□□□□ 0.12
HLA-FP30511 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-FP30511 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-FP30511 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-FP30511 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-FP30511 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-FP30511 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-FP30511 CROCCP1-201ENST00000426910 5675 ntBASIC15.8■□□□□ 0.12
HLA-FP30511 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-FP30511 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-FP30511 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 AC093525.8-201ENST00000624099 1342 ntBASIC15.8■□□□□ 0.12
HLA-FP30511 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HLA-FP30511 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-FP30511 KLF2P4-201ENST00000451959 1225 ntBASIC15.8■□□□□ 0.12
HLA-FP30511 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-FP30511 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-FP30511 FTH1P14-201ENST00000482930 551 ntBASIC15.8■□□□□ 0.12
HLA-FP30511 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-FP30511 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-FP30511 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HLA-FP30511 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.8■□□□□ 0.12
HLA-FP30511 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-FP30511 AP005019.2-201ENST00000615104 511 ntBASIC15.8■□□□□ 0.12
HLA-FP30511 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
HLA-FP30511 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HLA-FP30511 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-FP30511 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
HLA-FP30511 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-FP30511 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-FP30511 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-FP30511 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-FP30511 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-FP30511 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-FP30511 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-FP30511 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms