Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB3BP20337 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB3BP20337 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.79□□□□□ -0.2
RAB3BP20337 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
RAB3BP20337 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.79□□□□□ -0.2
RAB3BP20337 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.79□□□□□ -0.2
RAB3BP20337 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB3BP20337 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB3BP20337 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB3BP20337 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB3BP20337 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB3BP20337 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB3BP20337 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB3BP20337 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB3BP20337 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RAB3BP20337 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB3BP20337 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.78□□□□□ -0.2
RAB3BP20337 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.78□□□□□ -0.2
RAB3BP20337 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.78□□□□□ -0.2
RAB3BP20337 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB3BP20337 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB3BP20337 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAB3BP20337 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 WASH3P-207ENST00000560956 1394 ntBASIC13.78□□□□□ -0.2
RAB3BP20337 FO538757.1-201ENST00000623083 1397 ntBASIC13.78□□□□□ -0.2
RAB3BP20337 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB3BP20337 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
RAB3BP20337 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB3BP20337 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB3BP20337 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB3BP20337 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RAB3BP20337 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
RAB3BP20337 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RAB3BP20337 AC041040.2-201ENST00000622926 2899 ntBASIC13.77□□□□□ -0.2
RAB3BP20337 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB3BP20337 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RAB3BP20337 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RAB3BP20337 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB3BP20337 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RAB3BP20337 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB3BP20337 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB3BP20337 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB3BP20337 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB3BP20337 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB3BP20337 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB3BP20337 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAB3BP20337 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms