Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.19■□□□□ 0.18
BRAFP15056 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.19■□□□□ 0.18
BRAFP15056 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 AC009093.7-201ENST00000623853 1223 ntBASIC16.19■□□□□ 0.18
BRAFP15056 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.19■□□□□ 0.18
BRAFP15056 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.19■□□□□ 0.18
BRAFP15056 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
BRAFP15056 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 LINC00552-201ENST00000625151 2579 ntBASIC16.19■□□□□ 0.18
BRAFP15056 AL365209.1-201ENST00000624418 6473 ntBASIC16.19■□□□□ 0.18
BRAFP15056 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.19■□□□□ 0.18
BRAFP15056 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 AC007191.1-201ENST00000623179 2995 ntBASIC16.18■□□□□ 0.18
BRAFP15056 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 AC139749.1-202ENST00000617529 3139 ntBASIC16.18■□□□□ 0.18
BRAFP15056 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BRAFP15056 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 AC245100.5-201ENST00000452108 331 ntBASIC16.18■□□□□ 0.18
BRAFP15056 HLA-J-203ENST00000494367 1087 ntBASIC16.18■□□□□ 0.18
BRAFP15056 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.18■□□□□ 0.18
BRAFP15056 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.18■□□□□ 0.18
BRAFP15056 AC027307.2-201ENST00000591252 911 ntBASIC16.18■□□□□ 0.18
BRAFP15056 AC008267.7-201ENST00000624570 1194 ntBASIC16.18■□□□□ 0.18
BRAFP15056 AC084121.4-201ENST00000641598 221 ntBASIC16.18■□□□□ 0.18
BRAFP15056 AF228730.8-201ENST00000642140 221 ntBASIC16.18■□□□□ 0.18
BRAFP15056 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BRAFP15056 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 AC009090.5-201ENST00000624886 2285 ntBASIC16.18■□□□□ 0.18
BRAFP15056 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 MIR600HG-201ENST00000449175 5984 ntBASIC16.18■□□□□ 0.18
BRAFP15056 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.18■□□□□ 0.18
BRAFP15056 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.18■□□□□ 0.18
BRAFP15056 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
BRAFP15056 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
BRAFP15056 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.18■□□□□ 0.18
BRAFP15056 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BRAFP15056 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.18■□□□□ 0.18
BRAFP15056 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 AC232323.1-201ENST00000540724 2099 ntBASIC16.17■□□□□ 0.18
BRAFP15056 REXO1L5P-201ENST00000622260 2098 ntBASIC16.17■□□□□ 0.18
BRAFP15056 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
BRAFP15056 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
BRAFP15056 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.17■□□□□ 0.18
BRAFP15056 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 GPS2P2-201ENST00000430745 888 ntBASIC16.17■□□□□ 0.18
BRAFP15056 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.17■□□□□ 0.18
BRAFP15056 KRT18P34-201ENST00000488218 1270 ntBASIC16.17■□□□□ 0.18
BRAFP15056 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.17■□□□□ 0.18
BRAFP15056 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 AC109322.1-201ENST00000524499 1264 ntBASIC16.17■□□□□ 0.18
BRAFP15056 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.17■□□□□ 0.18
BRAFP15056 KRT8P23-201ENST00000560090 1207 ntBASIC16.17■□□□□ 0.18
BRAFP15056 AC093028.1-201ENST00000622998 982 ntBASIC16.17■□□□□ 0.18
BRAFP15056 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms