Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 PIN1P1-201ENST00000412108 996 ntBASIC17.97■□□□□ 0.47
SCG2P13521 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 FAM86LP-201ENST00000478302 853 ntBASIC17.97■□□□□ 0.47
SCG2P13521 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.97■□□□□ 0.47
SCG2P13521 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.97■□□□□ 0.47
SCG2P13521 AC027307.3-201ENST00000594262 1100 ntBASIC17.97■□□□□ 0.47
SCG2P13521 AC025181.2-201ENST00000606994 802 ntBASIC17.97■□□□□ 0.47
SCG2P13521 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.97■□□□□ 0.47
SCG2P13521 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SCG2P13521 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCG2P13521 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.96■□□□□ 0.47
SCG2P13521 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.96■□□□□ 0.47
SCG2P13521 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SCG2P13521 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
SCG2P13521 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
SCG2P13521 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 AL353779.1-201ENST00000434793 351 ntBASIC17.96■□□□□ 0.47
SCG2P13521 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.96■□□□□ 0.47
SCG2P13521 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.96■□□□□ 0.47
SCG2P13521 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.96■□□□□ 0.47
SCG2P13521 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.96■□□□□ 0.47
SCG2P13521 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
SCG2P13521 CHCHD2P3-201ENST00000603038 451 ntBASIC17.96■□□□□ 0.47
SCG2P13521 MIR8072-201ENST00000614241 80 ntBASIC17.96■□□□□ 0.47
SCG2P13521 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.96■□□□□ 0.47
SCG2P13521 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SCG2P13521 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.96■□□□□ 0.47
SCG2P13521 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.96■□□□□ 0.47
SCG2P13521 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
SCG2P13521 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SCG2P13521 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.96■□□□□ 0.47
SCG2P13521 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SCG2P13521 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.96■□□□□ 0.47
SCG2P13521 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCG2P13521 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SCG2P13521 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SCG2P13521 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.96■□□□□ 0.46
SCG2P13521 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
SCG2P13521 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.96■□□□□ 0.46
SCG2P13521 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.95■□□□□ 0.46
SCG2P13521 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SCG2P13521 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
SCG2P13521 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.95■□□□□ 0.46
SCG2P13521 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.95■□□□□ 0.46
SCG2P13521 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.95■□□□□ 0.46
SCG2P13521 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.95■□□□□ 0.46
SCG2P13521 AC093726.1-201ENST00000608064 963 ntBASIC17.95■□□□□ 0.46
SCG2P13521 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SCG2P13521 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.95■□□□□ 0.46
SCG2P13521 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.95■□□□□ 0.46
SCG2P13521 AL358472.5-202ENST00000641448 1267 ntBASIC17.95■□□□□ 0.46
SCG2P13521 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SCG2P13521 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.95■□□□□ 0.46
SCG2P13521 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.95■□□□□ 0.46
SCG2P13521 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCG2P13521 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCG2P13521 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCG2P13521 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCG2P13521 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SCG2P13521 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SCG2P13521 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 254 ms