Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.34■□□□□ 0.05
PCNAP12004 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.34■□□□□ 0.05
PCNAP12004 AP006288.1-201ENST00000446065 395 ntBASIC15.34■□□□□ 0.05
PCNAP12004 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.34■□□□□ 0.05
PCNAP12004 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.34■□□□□ 0.05
PCNAP12004 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.34■□□□□ 0.05
PCNAP12004 MIR4453-201ENST00000584019 89 ntBASIC15.34■□□□□ 0.05
PCNAP12004 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.34■□□□□ 0.05
PCNAP12004 AL450472.2-201ENST00000603663 1156 ntBASIC15.34■□□□□ 0.05
PCNAP12004 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.34■□□□□ 0.05
PCNAP12004 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.34■□□□□ 0.05
PCNAP12004 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCNAP12004 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.34■□□□□ 0.05
PCNAP12004 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.34■□□□□ 0.05
PCNAP12004 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.34■□□□□ 0.05
PCNAP12004 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.34■□□□□ 0.05
PCNAP12004 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCNAP12004 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.34■□□□□ 0.05
PCNAP12004 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
PCNAP12004 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCNAP12004 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCNAP12004 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.33■□□□□ 0.05
PCNAP12004 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCNAP12004 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.33■□□□□ 0.04
PCNAP12004 DNAJB3-202ENST00000449667 1266 ntBASIC15.33■□□□□ 0.04
PCNAP12004 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.33■□□□□ 0.04
PCNAP12004 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.33■□□□□ 0.04
PCNAP12004 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 AL691403.2-201ENST00000618460 490 ntBASIC15.33■□□□□ 0.04
PCNAP12004 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.33■□□□□ 0.04
PCNAP12004 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.33■□□□□ 0.04
PCNAP12004 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.33■□□□□ 0.04
PCNAP12004 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCNAP12004 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.33■□□□□ 0.04
PCNAP12004 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCNAP12004 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.33■□□□□ 0.04
PCNAP12004 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCNAP12004 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PCNAP12004 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCNAP12004 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCNAP12004 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCNAP12004 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCNAP12004 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCNAP12004 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCNAP12004 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCNAP12004 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCNAP12004 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCNAP12004 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.32■□□□□ 0.04
PCNAP12004 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCNAP12004 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
PCNAP12004 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
PCNAP12004 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCNAP12004 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCNAP12004 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.32■□□□□ 0.04
PCNAP12004 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.32■□□□□ 0.04
PCNAP12004 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCNAP12004 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.32■□□□□ 0.04
PCNAP12004 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.32■□□□□ 0.04
PCNAP12004 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCNAP12004 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PCNAP12004 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.32■□□□□ 0.04
PCNAP12004 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.32■□□□□ 0.04
PCNAP12004 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.32■□□□□ 0.04
PCNAP12004 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms