Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.71■□□□□ 0.27
FAM228BP0C875 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FAM228BP0C875 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
FAM228BP0C875 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
FAM228BP0C875 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 AC074338.1-201ENST00000416825 156 ntBASIC16.7■□□□□ 0.26
FAM228BP0C875 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.7■□□□□ 0.26
FAM228BP0C875 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.7■□□□□ 0.26
FAM228BP0C875 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.7■□□□□ 0.26
FAM228BP0C875 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.7■□□□□ 0.26
FAM228BP0C875 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.7■□□□□ 0.26
FAM228BP0C875 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.7■□□□□ 0.26
FAM228BP0C875 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.7■□□□□ 0.26
FAM228BP0C875 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
FAM228BP0C875 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.7■□□□□ 0.26
FAM228BP0C875 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.7■□□□□ 0.26
FAM228BP0C875 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM228BP0C875 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
FAM228BP0C875 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.69■□□□□ 0.26
FAM228BP0C875 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
FAM228BP0C875 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
FAM228BP0C875 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
FAM228BP0C875 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.69■□□□□ 0.26
FAM228BP0C875 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.69■□□□□ 0.26
FAM228BP0C875 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.69■□□□□ 0.26
FAM228BP0C875 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.69■□□□□ 0.26
FAM228BP0C875 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
FAM228BP0C875 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
FAM228BP0C875 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.69■□□□□ 0.26
FAM228BP0C875 AC026748.1-201ENST00000624349 3251 ntBASIC16.69■□□□□ 0.26
FAM228BP0C875 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.69■□□□□ 0.26
FAM228BP0C875 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FAM228BP0C875 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.69■□□□□ 0.26
FAM228BP0C875 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
FAM228BP0C875 AC232323.1-201ENST00000540724 2099 ntBASIC16.68■□□□□ 0.26
FAM228BP0C875 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 REXO1L5P-201ENST00000622260 2098 ntBASIC16.68■□□□□ 0.26
FAM228BP0C875 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.68■□□□□ 0.26
FAM228BP0C875 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.68■□□□□ 0.26
FAM228BP0C875 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FAM228BP0C875 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
FAM228BP0C875 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms