Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
FREM3P0C091 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
FREM3P0C091 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
FREM3P0C091 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.2□□□□□ -0.14
FREM3P0C091 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.2□□□□□ -0.14
FREM3P0C091 TTTY23B-201ENST00000442790 549 ntBASIC14.2□□□□□ -0.14
FREM3P0C091 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 GNRHR2-203ENST00000581100 1187 ntBASIC14.2□□□□□ -0.14
FREM3P0C091 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
FREM3P0C091 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 AC090616.6-203ENST00000579186 1945 ntBASIC14.2□□□□□ -0.14
FREM3P0C091 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 DRD5P1-201ENST00000456605 1438 ntBASIC14.19□□□□□ -0.14
FREM3P0C091 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
FREM3P0C091 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.19□□□□□ -0.14
FREM3P0C091 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
FREM3P0C091 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.19□□□□□ -0.14
FREM3P0C091 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.19□□□□□ -0.14
FREM3P0C091 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FREM3P0C091 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.19□□□□□ -0.14
FREM3P0C091 AL512384.1-201ENST00000406683 331 ntBASIC14.19□□□□□ -0.14
FREM3P0C091 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 AC007274.1-201ENST00000439805 662 ntBASIC14.19□□□□□ -0.14
FREM3P0C091 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 AC119751.2-201ENST00000504529 210 ntBASIC14.19□□□□□ -0.14
FREM3P0C091 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.19□□□□□ -0.14
FREM3P0C091 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.19□□□□□ -0.14
FREM3P0C091 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.19□□□□□ -0.14
FREM3P0C091 AC015910.1-201ENST00000579400 975 ntBASIC14.19□□□□□ -0.14
FREM3P0C091 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
FREM3P0C091 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.19□□□□□ -0.14
FREM3P0C091 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FREM3P0C091 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.19□□□□□ -0.14
FREM3P0C091 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FREM3P0C091 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
FREM3P0C091 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.19□□□□□ -0.14
FREM3P0C091 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 NME2P1-201ENST00000426182 414 ntBASIC14.18□□□□□ -0.14
FREM3P0C091 AL162726.2-201ENST00000438986 1017 ntBASIC14.18□□□□□ -0.14
FREM3P0C091 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.18□□□□□ -0.14
FREM3P0C091 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.18□□□□□ -0.14
FREM3P0C091 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.18□□□□□ -0.14
FREM3P0C091 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.18□□□□□ -0.14
FREM3P0C091 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.18□□□□□ -0.14
FREM3P0C091 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.18□□□□□ -0.14
FREM3P0C091 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 AC093726.1-201ENST00000608064 963 ntBASIC14.18□□□□□ -0.14
FREM3P0C091 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms