Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN1P05114 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HMGN1P05114 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN1P05114 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN1P05114 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HMGN1P05114 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HMGN1P05114 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGN1P05114 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HMGN1P05114 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGN1P05114 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN1P05114 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HMGN1P05114 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN1P05114 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN1P05114 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN1P05114 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HMGN1P05114 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HMGN1P05114 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.24□□□□□ -0.13
HMGN1P05114 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGN1P05114 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGN1P05114 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGN1P05114 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGN1P05114 FAM86C2P-203ENST00000528684 1004 ntBASIC14.24□□□□□ -0.13
HMGN1P05114 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGN1P05114 AC145285.3-201ENST00000564603 959 ntBASIC14.24□□□□□ -0.13
HMGN1P05114 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.24□□□□□ -0.13
HMGN1P05114 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 AC099522.2-201ENST00000607001 744 ntBASIC14.24□□□□□ -0.13
HMGN1P05114 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HMGN1P05114 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGN1P05114 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGN1P05114 CYP4F24P-201ENST00000586049 1580 ntBASIC14.24□□□□□ -0.13
HMGN1P05114 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
HMGN1P05114 FGD5P1-202ENST00000614866 2498 ntBASIC14.24□□□□□ -0.13
HMGN1P05114 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.24□□□□□ -0.13
HMGN1P05114 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGN1P05114 AC232323.1-201ENST00000540724 2099 ntBASIC14.24□□□□□ -0.13
HMGN1P05114 REXO1L5P-201ENST00000622260 2098 ntBASIC14.24□□□□□ -0.13
HMGN1P05114 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.24□□□□□ -0.13
HMGN1P05114 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGN1P05114 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGN1P05114 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGN1P05114 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGN1P05114 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMGN1P05114 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HMGN1P05114 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMGN1P05114 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HMGN1P05114 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 KRT18P2-201ENST00000447938 1258 ntBASIC14.23□□□□□ -0.13
HMGN1P05114 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.23□□□□□ -0.13
HMGN1P05114 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGN1P05114 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGN1P05114 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGN1P05114 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGN1P05114 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms