Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ALDH1A1P00352 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALDH1A1P00352 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ALDH1A1P00352 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALDH1A1P00352 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALDH1A1P00352 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALDH1A1P00352 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.58■□□□□ 0.41
ALDH1A1P00352 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALDH1A1P00352 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALDH1A1P00352 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALDH1A1P00352 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALDH1A1P00352 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALDH1A1P00352 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.58■□□□□ 0.4
ALDH1A1P00352 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 RPL13AP19-201ENST00000434320 584 ntBASIC17.58■□□□□ 0.4
ALDH1A1P00352 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.58■□□□□ 0.4
ALDH1A1P00352 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.58■□□□□ 0.4
ALDH1A1P00352 AL132994.2-201ENST00000603120 687 ntBASIC17.58■□□□□ 0.4
ALDH1A1P00352 AC009084.3-201ENST00000623356 437 ntBASIC17.58■□□□□ 0.4
ALDH1A1P00352 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALDH1A1P00352 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALDH1A1P00352 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALDH1A1P00352 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALDH1A1P00352 NEFHP1-201ENST00000412845 2629 ntBASIC17.58■□□□□ 0.4
ALDH1A1P00352 UBALD1-205ENST00000590891 2641 ntBASIC17.58■□□□□ 0.4
ALDH1A1P00352 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALDH1A1P00352 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 MIR648-201ENST00000385046 94 ntBASIC17.57■□□□□ 0.4
ALDH1A1P00352 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 AL627389.1-201ENST00000413508 1182 ntBASIC17.57■□□□□ 0.4
ALDH1A1P00352 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 POU5F1P2-201ENST00000521750 823 ntBASIC17.57■□□□□ 0.4
ALDH1A1P00352 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 AL031713.1-201ENST00000564813 661 ntBASIC17.57■□□□□ 0.4
ALDH1A1P00352 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.57■□□□□ 0.4
ALDH1A1P00352 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALDH1A1P00352 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ALDH1A1P00352 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 TBC1D3J-201ENST00000620719 1426 ntBASIC17.56■□□□□ 0.4
ALDH1A1P00352 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms