Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.1■□□□□ 0.17
TOP3BO95985 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.1■□□□□ 0.17
TOP3BO95985 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.1■□□□□ 0.17
TOP3BO95985 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.1■□□□□ 0.17
TOP3BO95985 HLA-V-204ENST00000476601 1289 ntBASIC16.1■□□□□ 0.17
TOP3BO95985 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.1■□□□□ 0.17
TOP3BO95985 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.1■□□□□ 0.17
TOP3BO95985 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.1■□□□□ 0.17
TOP3BO95985 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.1■□□□□ 0.17
TOP3BO95985 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.1■□□□□ 0.17
TOP3BO95985 MIR3909-201ENST00000579518 119 ntBASIC16.1■□□□□ 0.17
TOP3BO95985 TMEM261P1-201ENST00000604899 340 ntBASIC16.1■□□□□ 0.17
TOP3BO95985 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.1■□□□□ 0.17
TOP3BO95985 AC004790.1-201ENST00000612686 536 ntBASIC16.1■□□□□ 0.17
TOP3BO95985 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TOP3BO95985 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.1■□□□□ 0.17
TOP3BO95985 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 AC138035.3-201ENST00000622706 2791 ntBASIC16.1■□□□□ 0.17
TOP3BO95985 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.1■□□□□ 0.17
TOP3BO95985 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TOP3BO95985 AC023157.3-201ENST00000619086 2088 ntBASIC16.1■□□□□ 0.17
TOP3BO95985 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TOP3BO95985 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TOP3BO95985 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.1■□□□□ 0.17
TOP3BO95985 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.09■□□□□ 0.17
TOP3BO95985 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 AC006486.2-201ENST00000624246 2199 ntBASIC16.09■□□□□ 0.17
TOP3BO95985 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.09■□□□□ 0.17
TOP3BO95985 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
TOP3BO95985 HAUS4P1-201ENST00000406739 1145 ntBASIC16.09■□□□□ 0.17
TOP3BO95985 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.09■□□□□ 0.17
TOP3BO95985 AC106886.1-201ENST00000568660 600 ntBASIC16.09■□□□□ 0.17
TOP3BO95985 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 TEX28P1-201ENST00000613479 1221 ntBASIC16.09■□□□□ 0.17
TOP3BO95985 TEX28P2-201ENST00000617764 1221 ntBASIC16.09■□□□□ 0.17
TOP3BO95985 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.09■□□□□ 0.17
TOP3BO95985 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TOP3BO95985 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOP3BO95985 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TOP3BO95985 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.08■□□□□ 0.17
TOP3BO95985 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.08■□□□□ 0.17
TOP3BO95985 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TOP3BO95985 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.08■□□□□ 0.17
TOP3BO95985 AC091951.1-201ENST00000512854 2465 ntBASIC16.08■□□□□ 0.17
TOP3BO95985 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TOP3BO95985 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TOP3BO95985 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TOP3BO95985 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TOP3BO95985 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TOP3BO95985 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TOP3BO95985 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TOP3BO95985 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
TOP3BO95985 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TOP3BO95985 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TOP3BO95985 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TOP3BO95985 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TOP3BO95985 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.08■□□□□ 0.16
TOP3BO95985 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms