Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCNKO75909 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 AL353732.1-201ENST00000569618 1459 ntBASIC13.63□□□□□ -0.23
CCNKO75909 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 LINC01568-207ENST00000641790 1380 ntBASIC13.63□□□□□ -0.23
CCNKO75909 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 MIR662-201ENST00000384847 95 ntBASIC13.63□□□□□ -0.23
CCNKO75909 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 SLC25A3P1-201ENST00000443844 931 ntBASIC13.63□□□□□ -0.23
CCNKO75909 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.63□□□□□ -0.23
CCNKO75909 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.63□□□□□ -0.23
CCNKO75909 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CCNKO75909 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.63□□□□□ -0.23
CCNKO75909 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCNKO75909 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCNKO75909 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CCNKO75909 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCNKO75909 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCNKO75909 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CCNKO75909 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 FAM8A6P-201ENST00000407496 1135 ntBASIC13.62□□□□□ -0.23
CCNKO75909 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.62□□□□□ -0.23
CCNKO75909 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms