Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK1BO75841 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK1BO75841 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK1BO75841 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 AL592071.1-201ENST00000611956 408 ntBASIC13.67□□□□□ -0.22
UPK1BO75841 AC124864.1-201ENST00000623408 392 ntBASIC13.67□□□□□ -0.22
UPK1BO75841 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK1BO75841 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK1BO75841 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
UPK1BO75841 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK1BO75841 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK1BO75841 TMEM198B-204ENST00000484016 896 ntBASIC13.66□□□□□ -0.22
UPK1BO75841 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
UPK1BO75841 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UPK1BO75841 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK1BO75841 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
UPK1BO75841 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK1BO75841 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK1BO75841 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 AC020658.7-201ENST00000624274 2442 ntBASIC13.65□□□□□ -0.22
UPK1BO75841 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK1BO75841 AC018442.1-201ENST00000421439 2061 ntBASIC13.65□□□□□ -0.22
UPK1BO75841 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK1BO75841 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK1BO75841 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK1BO75841 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
UPK1BO75841 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK1BO75841 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.65□□□□□ -0.22
UPK1BO75841 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms