Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC023024.2-201ENST00000623561 1993 ntBASIC19.3■□□□□ 0.68
SMARCA5O60264 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.3■□□□□ 0.68
SMARCA5O60264 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SMARCA5O60264 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCA5O60264 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 MIR661-201ENST00000384842 89 ntBASIC19.3■□□□□ 0.68
SMARCA5O60264 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.3■□□□□ 0.68
SMARCA5O60264 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.3■□□□□ 0.68
SMARCA5O60264 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCA5O60264 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.3■□□□□ 0.68
SMARCA5O60264 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCA5O60264 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SMARCA5O60264 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SMARCA5O60264 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SMARCA5O60264 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SMARCA5O60264 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SMARCA5O60264 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.3■□□□□ 0.68
SMARCA5O60264 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 AC023157.3-201ENST00000619086 2088 ntBASIC19.29■□□□□ 0.68
SMARCA5O60264 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCA5O60264 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCA5O60264 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.29■□□□□ 0.68
SMARCA5O60264 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMARCA5O60264 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SMARCA5O60264 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMARCA5O60264 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SMARCA5O60264 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCA5O60264 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SMARCA5O60264 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SMARCA5O60264 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCA5O60264 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SMARCA5O60264 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.29■□□□□ 0.68
SMARCA5O60264 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.29■□□□□ 0.68
SMARCA5O60264 AC092337.1-201ENST00000568699 1129 ntBASIC19.29■□□□□ 0.68
SMARCA5O60264 AC015910.1-201ENST00000579400 975 ntBASIC19.29■□□□□ 0.68
SMARCA5O60264 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.29■□□□□ 0.68
SMARCA5O60264 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.29■□□□□ 0.68
SMARCA5O60264 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.29■□□□□ 0.68
SMARCA5O60264 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.29■□□□□ 0.68
SMARCA5O60264 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.29■□□□□ 0.68
SMARCA5O60264 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCA5O60264 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCA5O60264 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.29■□□□□ 0.68
SMARCA5O60264 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
SMARCA5O60264 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMARCA5O60264 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SMARCA5O60264 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCA5O60264 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCA5O60264 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCA5O60264 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMARCA5O60264 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.28■□□□□ 0.68
SMARCA5O60264 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.28■□□□□ 0.68
SMARCA5O60264 TOMM22P5-201ENST00000416399 439 ntBASIC19.28■□□□□ 0.68
SMARCA5O60264 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCA5O60264 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.28■□□□□ 0.68
SMARCA5O60264 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.28■□□□□ 0.68
SMARCA5O60264 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms