Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.57■□□□□ 0.4
ACTN4O43707 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ACTN4O43707 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.57■□□□□ 0.4
ACTN4O43707 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ACTN4O43707 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.57■□□□□ 0.4
ACTN4O43707 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.57■□□□□ 0.4
ACTN4O43707 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.57■□□□□ 0.4
ACTN4O43707 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ACTN4O43707 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ACTN4O43707 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.56■□□□□ 0.4
ACTN4O43707 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ACTN4O43707 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
ACTN4O43707 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.56■□□□□ 0.4
ACTN4O43707 AC004967.1-201ENST00000453589 447 ntBASIC17.56■□□□□ 0.4
ACTN4O43707 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.56■□□□□ 0.4
ACTN4O43707 SLED1-202ENST00000512051 380 ntBASIC17.56■□□□□ 0.4
ACTN4O43707 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.56■□□□□ 0.4
ACTN4O43707 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
ACTN4O43707 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.56■□□□□ 0.4
ACTN4O43707 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ACTN4O43707 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ACTN4O43707 CICP23-201ENST00000605013 2741 ntBASIC17.56■□□□□ 0.4
ACTN4O43707 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ACTN4O43707 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.56■□□□□ 0.4
ACTN4O43707 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.56■□□□□ 0.4
ACTN4O43707 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
ACTN4O43707 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.56■□□□□ 0.4
ACTN4O43707 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ACTN4O43707 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ACTN4O43707 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ACTN4O43707 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 ZBED1P1-201ENST00000502364 1930 ntBASIC17.55■□□□□ 0.4
ACTN4O43707 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ACTN4O43707 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.55■□□□□ 0.4
ACTN4O43707 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.55■□□□□ 0.4
ACTN4O43707 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.55■□□□□ 0.4
ACTN4O43707 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.55■□□□□ 0.4
ACTN4O43707 AL512361.1-201ENST00000554200 418 ntBASIC17.55■□□□□ 0.4
ACTN4O43707 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.55■□□□□ 0.4
ACTN4O43707 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.55■□□□□ 0.4
ACTN4O43707 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 SPDYE12P-201ENST00000618416 771 ntBASIC17.55■□□□□ 0.4
ACTN4O43707 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 MIR6069-201ENST00000620069 79 ntBASIC17.55■□□□□ 0.4
ACTN4O43707 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.55■□□□□ 0.4
ACTN4O43707 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.55■□□□□ 0.4
ACTN4O43707 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.55■□□□□ 0.4
ACTN4O43707 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ACTN4O43707 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms