Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXA2O43364 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXA2O43364 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXA2O43364 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.62■□□□□ 0.25
HOXA2O43364 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXA2O43364 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HOXA2O43364 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
HOXA2O43364 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HOXA2O43364 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXA2O43364 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HOXA2O43364 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA2O43364 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HOXA2O43364 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA2O43364 AC015818.8-201ENST00000587907 1519 ntBASIC16.61■□□□□ 0.25
HOXA2O43364 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA2O43364 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXA2O43364 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXA2O43364 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.61■□□□□ 0.25
HOXA2O43364 C2orf69P2-201ENST00000562032 1123 ntBASIC16.61■□□□□ 0.25
HOXA2O43364 RN7SL275P-201ENST00000582762 335 ntBASIC16.61■□□□□ 0.25
HOXA2O43364 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.61■□□□□ 0.25
HOXA2O43364 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA2O43364 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 AL139099.5-201ENST00000635274 300 ntBASIC16.61■□□□□ 0.25
HOXA2O43364 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HOXA2O43364 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HOXA2O43364 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA2O43364 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXA2O43364 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HOXA2O43364 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXA2O43364 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HOXA2O43364 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXA2O43364 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXA2O43364 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HOXA2O43364 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXA2O43364 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HOXA2O43364 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXA2O43364 SSR1P1-201ENST00000407630 814 ntBASIC16.6■□□□□ 0.25
HOXA2O43364 AC007969.1-201ENST00000433675 447 ntBASIC16.6■□□□□ 0.25
HOXA2O43364 AL591846.1-201ENST00000451736 433 ntBASIC16.6■□□□□ 0.25
HOXA2O43364 AC104306.2-201ENST00000451877 341 ntBASIC16.6■□□□□ 0.25
HOXA2O43364 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXA2O43364 MTND2P7-201ENST00000521337 640 ntBASIC16.6■□□□□ 0.25
HOXA2O43364 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.6■□□□□ 0.25
HOXA2O43364 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.6■□□□□ 0.25
HOXA2O43364 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.6■□□□□ 0.25
HOXA2O43364 ECM1P1-201ENST00000604092 1279 ntBASIC16.6■□□□□ 0.25
HOXA2O43364 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXA2O43364 ENPP7P14-201ENST00000621765 1040 ntBASIC16.6■□□□□ 0.25
HOXA2O43364 AL603764.1-201ENST00000636452 321 ntBASIC16.6■□□□□ 0.25
HOXA2O43364 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXA2O43364 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HOXA2O43364 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HOXA2O43364 AC018695.7-201ENST00000624587 2492 ntBASIC16.6■□□□□ 0.25
HOXA2O43364 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms