Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.75■□□□□ 0.11
PFDN6O15212 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PFDN6O15212 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PFDN6O15212 DNAJB3-202ENST00000449667 1266 ntBASIC15.75■□□□□ 0.11
PFDN6O15212 HLA-J-203ENST00000494367 1087 ntBASIC15.75■□□□□ 0.11
PFDN6O15212 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.75■□□□□ 0.11
PFDN6O15212 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 BANF1P1-201ENST00000553684 263 ntBASIC15.75■□□□□ 0.11
PFDN6O15212 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.75■□□□□ 0.11
PFDN6O15212 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PFDN6O15212 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PFDN6O15212 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.75■□□□□ 0.11
PFDN6O15212 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.75■□□□□ 0.11
PFDN6O15212 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.75■□□□□ 0.11
PFDN6O15212 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.75■□□□□ 0.11
PFDN6O15212 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.75■□□□□ 0.11
PFDN6O15212 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
PFDN6O15212 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN6O15212 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PFDN6O15212 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PFDN6O15212 AC104640.1-201ENST00000562617 2109 ntBASIC15.74■□□□□ 0.11
PFDN6O15212 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.74■□□□□ 0.11
PFDN6O15212 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PFDN6O15212 SSR4P1-203ENST00000599569 2260 ntBASIC15.74■□□□□ 0.11
PFDN6O15212 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN6O15212 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 AZGP1P1-201ENST00000411909 902 ntBASIC15.74■□□□□ 0.11
PFDN6O15212 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.74■□□□□ 0.11
PFDN6O15212 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PFDN6O15212 TSEN15P1-201ENST00000423257 515 ntBASIC15.74■□□□□ 0.11
PFDN6O15212 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN6O15212 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PFDN6O15212 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PFDN6O15212 HNRNPUP1-201ENST00000554987 333 ntBASIC15.74■□□□□ 0.11
PFDN6O15212 AL079307.3-201ENST00000556114 283 ntBASIC15.74■□□□□ 0.11
PFDN6O15212 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 AC004449.1-201ENST00000564240 433 ntBASIC15.74■□□□□ 0.11
PFDN6O15212 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN6O15212 AL133215.2-201ENST00000609242 977 ntBASIC15.74■□□□□ 0.11
PFDN6O15212 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN6O15212 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PFDN6O15212 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN6O15212 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.74■□□□□ 0.11
PFDN6O15212 AC092127.1-201ENST00000567093 3455 ntBASIC15.74■□□□□ 0.11
PFDN6O15212 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PFDN6O15212 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN6O15212 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN6O15212 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PFDN6O15212 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.73■□□□□ 0.11
PFDN6O15212 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.73■□□□□ 0.11
PFDN6O15212 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
PFDN6O15212 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PFDN6O15212 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.73■□□□□ 0.11
PFDN6O15212 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.73■□□□□ 0.11
PFDN6O15212 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.73■□□□□ 0.11
PFDN6O15212 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PFDN6O15212 AC067863.1-201ENST00000494933 530 ntBASIC15.73■□□□□ 0.11
PFDN6O15212 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.73■□□□□ 0.11
PFDN6O15212 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.73■□□□□ 0.11
PFDN6O15212 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.73■□□□□ 0.11
PFDN6O15212 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms