Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 AC067863.1-201ENST00000494933 530 ntBASIC16.76■□□□□ 0.27
FOXN3O00409 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 DUX4L27-201ENST00000554796 1261 ntBASIC16.76■□□□□ 0.27
FOXN3O00409 AC044860.1-202ENST00000559481 777 ntBASIC16.76■□□□□ 0.27
FOXN3O00409 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.76■□□□□ 0.27
FOXN3O00409 AL844908.2-201ENST00000609461 460 ntBASIC16.76■□□□□ 0.27
FOXN3O00409 AL590560.3-201ENST00000623350 461 ntBASIC16.76■□□□□ 0.27
FOXN3O00409 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
FOXN3O00409 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FOXN3O00409 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 LINC02228-204ENST00000642115 2962 ntBASIC16.76■□□□□ 0.27
FOXN3O00409 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FOXN3O00409 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
FOXN3O00409 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXN3O00409 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.76■□□□□ 0.27
FOXN3O00409 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
FOXN3O00409 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXN3O00409 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
FOXN3O00409 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 RPL5P21-201ENST00000404620 815 ntBASIC16.75■□□□□ 0.27
FOXN3O00409 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.75■□□□□ 0.27
FOXN3O00409 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
FOXN3O00409 METTL21AP1-201ENST00000438852 635 ntBASIC16.75■□□□□ 0.27
FOXN3O00409 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.75■□□□□ 0.27
FOXN3O00409 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.75■□□□□ 0.27
FOXN3O00409 FAM86GP-201ENST00000448322 971 ntBASIC16.75■□□□□ 0.27
FOXN3O00409 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.75■□□□□ 0.27
FOXN3O00409 SDHAP3-202ENST00000515467 728 ntBASIC16.75■□□□□ 0.27
FOXN3O00409 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.75■□□□□ 0.27
FOXN3O00409 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 AL158211.3-201ENST00000607385 239 ntBASIC16.75■□□□□ 0.27
FOXN3O00409 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXN3O00409 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXN3O00409 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
FOXN3O00409 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXN3O00409 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
FOXN3O00409 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 AC100757.3-201ENST00000622361 1406 ntBASIC16.74■□□□□ 0.27
FOXN3O00409 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
FOXN3O00409 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms