Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PDLIM1O00151 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM1O00151 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PDLIM1O00151 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM1O00151 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PDLIM1O00151 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.02■□□□□ -0
PDLIM1O00151 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM1O00151 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PDLIM1O00151 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.02■□□□□ -0
PDLIM1O00151 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM1O00151 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDLIM1O00151 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM1O00151 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDLIM1O00151 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PDLIM1O00151 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.02■□□□□ -0
PDLIM1O00151 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.02■□□□□ -0
PDLIM1O00151 HCG4B-203ENST00000450128 991 ntBASIC15.02■□□□□ -0
PDLIM1O00151 AC140113.2-201ENST00000604370 208 ntBASIC15.02■□□□□ -0
PDLIM1O00151 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.02■□□□□ -0
PDLIM1O00151 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDLIM1O00151 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.02■□□□□ -0
PDLIM1O00151 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.02□□□□□ -0.01
PDLIM1O00151 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM1O00151 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.02□□□□□ -0.01
PDLIM1O00151 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM1O00151 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM1O00151 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.02□□□□□ -0.01
PDLIM1O00151 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.02□□□□□ -0.01
PDLIM1O00151 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM1O00151 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
PDLIM1O00151 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM1O00151 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM1O00151 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM1O00151 FGD5P1-202ENST00000614866 2498 ntBASIC15.02□□□□□ -0.01
PDLIM1O00151 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.02□□□□□ -0.01
PDLIM1O00151 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
PDLIM1O00151 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.02□□□□□ -0.01
PDLIM1O00151 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM1O00151 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.02□□□□□ -0.01
PDLIM1O00151 AC011477.6-201ENST00000604980 1927 ntBASIC15.02□□□□□ -0.01
PDLIM1O00151 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDLIM1O00151 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM1O00151 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PDLIM1O00151 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM1O00151 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM1O00151 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
PDLIM1O00151 PCDHA3-202ENST00000532566 4594 ntBASIC15.01□□□□□ -0.01
PDLIM1O00151 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.01□□□□□ -0.01
PDLIM1O00151 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM1O00151 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM1O00151 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM1O00151 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM1O00151 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM1O00151 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.01□□□□□ -0.01
PDLIM1O00151 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM1O00151 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.01□□□□□ -0.01
PDLIM1O00151 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.01□□□□□ -0.01
PDLIM1O00151 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM1O00151 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.01□□□□□ -0.01
PDLIM1O00151 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.01□□□□□ -0.01
PDLIM1O00151 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM1O00151 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM1O00151 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM1O00151 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM1O00151 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15□□□□□ -0.01
PDLIM1O00151 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
PDLIM1O00151 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15□□□□□ -0.01
PDLIM1O00151 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM1O00151 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 AC136759.1-202ENST00000530858 2194 ntBASIC15□□□□□ -0.01
PDLIM1O00151 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PDLIM1O00151 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
PDLIM1O00151 CRYGEP-201ENST00000412192 528 ntBASIC15□□□□□ -0.01
PDLIM1O00151 IGLL3P-201ENST00000412472 434 ntBASIC15□□□□□ -0.01
PDLIM1O00151 MED15P5-201ENST00000423150 992 ntBASIC15□□□□□ -0.01
PDLIM1O00151 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15□□□□□ -0.01
PDLIM1O00151 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 MIR4751-201ENST00000578027 74 ntBASIC15□□□□□ -0.01
PDLIM1O00151 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15□□□□□ -0.01
PDLIM1O00151 AC064836.3-201ENST00000607928 673 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms