Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM88BA6NKF7 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 AC138932.1-201ENST00000534164 6830 ntBASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 AC073911.3-201ENST00000624401 631 ntBASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 AC141586.5-201ENST00000624546 2050 ntBASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 NEFHP1-201ENST00000412845 2629 ntBASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 KRT8P21-201ENST00000430398 1491 ntBASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM88BA6NKF7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 SHC1P1-201ENST00000425230 1745 ntBASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 MIR6769A-201ENST00000617340 73 ntBASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 E2F3P2-201ENST00000447755 1422 ntBASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 AP000593.2-201ENST00000542775 1433 ntBASIC17.81■□□□□ 0.44
TMEM88BA6NKF7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 FKBP4P6-201ENST00000457486 1332 ntBASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AL627422.1-201ENST00000434104 580 ntBASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AC026410.1-201ENST00000507366 1101 ntBASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms