Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AL139094.1-201ENST00000405549 1188 ntBASIC13.64□□□□□ -0.23
MBD3L3A6NE82 CD8B2-202ENST00000417670 633 ntBASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RNA5SP486-201ENST00000515961 83 ntBASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AC078819.1-201ENST00000547454 765 ntBASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AC012085.1-201ENST00000548270 765 ntBASIC13.64□□□□□ -0.23
MBD3L3A6NE82 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RN7SL48P-201ENST00000579283 293 ntBASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AC138951.2-201ENST00000623455 1161 ntBASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L3A6NE82 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 AC084018.2-201ENST00000613093 2607 ntBASIC13.63□□□□□ -0.23
MBD3L3A6NE82 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 SAMD11P1-201ENST00000571429 661 ntBASIC13.63□□□□□ -0.23
MBD3L3A6NE82 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 KRT8P14-201ENST00000414254 1442 ntBASIC13.63□□□□□ -0.23
MBD3L3A6NE82 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 AC148477.4-201ENST00000613430 1793 ntBASIC13.63□□□□□ -0.23
MBD3L3A6NE82 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms