Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 AL121723.1-201ENST00000445194 1519 ntBASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC092384.3-202ENST00000564646 2873 ntBASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 NORAD-201ENST00000565493 5339 ntBASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 MEP1AP4-201ENST00000423244 1087 ntBASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 AC009118.2-201ENST00000613275 655 ntBASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 PPT1-215ENST00000641471 2368 ntBASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC196A0A1B0GTZ2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 AC104794.3-201ENST00000566840 1248 ntBASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 AC011467.4-201ENST00000594891 528 ntBASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 AC126177.1-201ENST00000547829 2218 ntBASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC196A0A1B0GTZ2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCDC196A0A1B0GTZ2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC196A0A1B0GTZ2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC196A0A1B0GTZ2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC196A0A1B0GTZ2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms