Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 MEP1AP4-201ENST00000423244 1087 ntBASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 AL353779.1-201ENST00000434793 351 ntBASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 API5-211ENST00000534695 560 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC4Q9Y5F7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 KRT18P43-201ENST00000469825 1281 ntBASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 RN7SL399P-201ENST00000471648 279 ntBASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 AC055876.2-201ENST00000531834 546 ntBASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 AC015910.1-201ENST00000579400 975 ntBASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 MIR8072-201ENST00000614241 80 ntBASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC4Q9Y5F7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 SSR4P1-203ENST00000599569 2260 ntBASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms