Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SPDYE9P-201ENST00000570642 692 ntBASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 SPDYE10P-202ENST00000612005 668 ntBASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 SPDYE8P-202ENST00000612377 668 ntBASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AL355306.1-201ENST00000415580 579 ntBASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 HTR5BP-201ENST00000430851 1154 ntBASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AP000347.1-202ENST00000435868 847 ntBASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AC099522.2-201ENST00000607001 744 ntBASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AL365330.1-201ENST00000607459 531 ntBASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AC092902.6-201ENST00000641783 218 ntBASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
HHLA3Q9XRX5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HHLA3Q9XRX5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.53□□□□□ -0.56
HHLA3Q9XRX5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
HHLA3Q9XRX5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.53□□□□□ -0.56
HHLA3Q9XRX5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HHLA3Q9XRX5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.53□□□□□ -0.56
HHLA3Q9XRX5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms