Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 RNMTL1P1-201ENST00000454103 560 ntBASIC20.98■□□□□ 0.95
PHF8Q9UPP1 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 MIR7845-201ENST00000618396 99 ntBASIC20.98■□□□□ 0.95
PHF8Q9UPP1 AC138466.3-201ENST00000619983 221 ntBASIC20.98■□□□□ 0.95
PHF8Q9UPP1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AC007274.2-201ENST00000421675 662 ntBASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 SAMD11P1-201ENST00000571429 661 ntBASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AC004466.1-201ENST00000599515 1080 ntBASIC20.97■□□□□ 0.95
PHF8Q9UPP1 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AL603764.1-201ENST00000636452 321 ntBASIC20.97■□□□□ 0.95
PHF8Q9UPP1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AL596087.1-201ENST00000400979 1969 ntBASIC20.97■□□□□ 0.95
PHF8Q9UPP1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 CLUHP2-201ENST00000426660 1303 ntBASIC20.97■□□□□ 0.95
PHF8Q9UPP1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AC084364.1-201ENST00000551967 1556 ntBASIC20.97■□□□□ 0.95
PHF8Q9UPP1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.97■□□□□ 0.95
PHF8Q9UPP1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC20.96■□□□□ 0.95
PHF8Q9UPP1 AC012618.1-201ENST00000461223 412 ntBASIC20.96■□□□□ 0.95
PHF8Q9UPP1 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms