Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 ZNF259P1-201ENST00000407656 1365 ntBASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 AC007967.2-201ENST00000432613 625 ntBASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 AC034105.1-201ENST00000563488 319 ntBASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 LINC01101-201ENST00000622953 1884 ntBASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB4Q9UN71 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 AC024267.1-201ENST00000582320 895 ntBASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms