Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.11□□□□□ -0.15
PARPBPQ9NWS1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AC022144.1-201ENST00000602255 1580 ntBASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AZGP1P1-201ENST00000411909 902 ntBASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 TSSK5P-201ENST00000423978 907 ntBASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 HIST3H2BA-201ENST00000436555 524 ntBASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AC010336.2-201ENST00000564226 506 ntBASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AL390955.2-201ENST00000603032 514 ntBASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AJ011932.1-201ENST00000621707 465 ntBASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PARPBPQ9NWS1 AP002414.2-201ENST00000591780 3365 ntBASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AC004890.2-204ENST00000481968 304 ntBASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 PAUPAR-201ENST00000630360 2965 ntBASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PARPBPQ9NWS1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
PARPBPQ9NWS1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PARPBPQ9NWS1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms