Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 RARRES2P5-201ENST00000564013 466 ntBASIC16.68■□□□□ 0.26
CISHQ9NSE2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 AC000095.1-201ENST00000603208 874 ntBASIC16.68■□□□□ 0.26
CISHQ9NSE2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CISHQ9NSE2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.68■□□□□ 0.26
CISHQ9NSE2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 AC093004.1-201ENST00000508850 424 ntBASIC16.67■□□□□ 0.26
CISHQ9NSE2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CISHQ9NSE2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
CISHQ9NSE2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 AC126177.1-201ENST00000547829 2218 ntBASIC16.66■□□□□ 0.26
CISHQ9NSE2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CISHQ9NSE2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CISHQ9NSE2 MEP1AP4-201ENST00000423244 1087 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms