Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC009093.7-201ENST00000623853 1223 ntBASIC15.82■□□□□ 0.12
TRIM4Q9C037 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 SLC22A20-204ENST00000530038 1673 ntBASIC15.82■□□□□ 0.12
TRIM4Q9C037 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 CICP24-201ENST00000605464 2705 ntBASIC15.81■□□□□ 0.12
TRIM4Q9C037 AC107918.4-201ENST00000641966 3141 ntBASIC15.81■□□□□ 0.12
TRIM4Q9C037 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.81■□□□□ 0.12
TRIM4Q9C037 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 AC005237.2-201ENST00000434368 219 ntBASIC15.81■□□□□ 0.12
TRIM4Q9C037 RHOQP3-201ENST00000437982 621 ntBASIC15.81■□□□□ 0.12
TRIM4Q9C037 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 AC015911.4-201ENST00000588022 1070 ntBASIC15.81■□□□□ 0.12
TRIM4Q9C037 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 AC007191.1-201ENST00000623179 2995 ntBASIC15.81■□□□□ 0.12
TRIM4Q9C037 AC092919.2-201ENST00000623631 1645 ntBASIC15.81■□□□□ 0.12
TRIM4Q9C037 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM4Q9C037 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM4Q9C037 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM4Q9C037 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRIM4Q9C037 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM4Q9C037 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM4Q9C037 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM4Q9C037 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM4Q9C037 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM4Q9C037 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM4Q9C037 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms