Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC007389.4-201ENST00000454674 793 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 FTH1P14-201ENST00000482930 551 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AP001889.1-201ENST00000525414 633 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AP001582.1-201ENST00000525856 295 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC120045.2-201ENST00000567334 178 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC133539.2-201ENST00000604757 467 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC011270.2-201ENST00000624293 2550 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 INTS4P2-202ENST00000614726 2019 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 DBET-201ENST00000630918 3363 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 DRD5P1-201ENST00000456605 1438 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 MST1L-201ENST00000442552 2185 ntBASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-3Q9BYR4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms