Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM62Q9BVG3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 MYCLP2-201ENST00000449268 967 ntBASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AL049840.4-201ENST00000602422 811 ntBASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AL662799.1-202ENST00000614205 422 ntBASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AC007431.3-201ENST00000623221 587 ntBASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM62Q9BVG3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 AC090616.6-203ENST00000579186 1945 ntBASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 BRI3BPP1-201ENST00000594224 787 ntBASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM62Q9BVG3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM62Q9BVG3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM62Q9BVG3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM62Q9BVG3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM62Q9BVG3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM62Q9BVG3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM62Q9BVG3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRIM62Q9BVG3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM62Q9BVG3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms