Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC10.44□□□□□ -0.74
LITAFQ99732 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC10.44□□□□□ -0.74
LITAFQ99732 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 MIR4515-201ENST00000584082 81 ntBASIC10.44□□□□□ -0.74
LITAFQ99732 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
LITAFQ99732 SDCCAG3P1-201ENST00000589292 1150 ntBASIC10.44□□□□□ -0.74
LITAFQ99732 AC092329.2-201ENST00000598402 547 ntBASIC10.44□□□□□ -0.74
LITAFQ99732 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
LITAFQ99732 OR2I1P-209ENST00000641730 5365 ntBASIC10.44□□□□□ -0.74
LITAFQ99732 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LITAFQ99732 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
LITAFQ99732 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 AC130686.1-201ENST00000622936 2466 ntBASIC10.44□□□□□ -0.74
LITAFQ99732 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
LITAFQ99732 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.44□□□□□ -0.74
LITAFQ99732 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 CR383656.2-201ENST00000548656 2254 ntBASIC10.44□□□□□ -0.74
LITAFQ99732 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
LITAFQ99732 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.43□□□□□ -0.74
LITAFQ99732 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
LITAFQ99732 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC10.43□□□□□ -0.74
LITAFQ99732 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 HMGA1P7-201ENST00000406908 502 ntBASIC10.43□□□□□ -0.74
LITAFQ99732 AC087499.1-201ENST00000418141 1075 ntBASIC10.43□□□□□ -0.74
LITAFQ99732 DAP-202ENST00000432074 1048 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC10.43□□□□□ -0.74
LITAFQ99732 TK2-213ENST00000563369 882 ntTSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 CCNC-219ENST00000627680 896 ntTSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LITAFQ99732 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LITAFQ99732 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.43□□□□□ -0.74
LITAFQ99732 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms