Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
NDNQ99608 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.8■□□□□ 0.12
NDNQ99608 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NDNQ99608 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NDNQ99608 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.8■□□□□ 0.12
NDNQ99608 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
NDNQ99608 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.8■□□□□ 0.12
NDNQ99608 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.8■□□□□ 0.12
NDNQ99608 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NDNQ99608 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.79■□□□□ 0.12
NDNQ99608 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NDNQ99608 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.79■□□□□ 0.12
NDNQ99608 AL109954.1-202ENST00000564051 2148 ntBASIC15.79■□□□□ 0.12
NDNQ99608 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.79■□□□□ 0.12
NDNQ99608 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.79■□□□□ 0.12
NDNQ99608 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
NDNQ99608 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 RPSAP43-201ENST00000402237 625 ntBASIC15.79■□□□□ 0.12
NDNQ99608 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.79■□□□□ 0.12
NDNQ99608 GPS2P2-201ENST00000430745 888 ntBASIC15.79■□□□□ 0.12
NDNQ99608 RBPMS2P1-201ENST00000437762 623 ntBASIC15.79■□□□□ 0.12
NDNQ99608 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.79■□□□□ 0.12
NDNQ99608 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.79■□□□□ 0.12
NDNQ99608 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.79■□□□□ 0.12
NDNQ99608 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.79■□□□□ 0.12
NDNQ99608 BANF1P1-201ENST00000553684 263 ntBASIC15.79■□□□□ 0.12
NDNQ99608 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.79■□□□□ 0.12
NDNQ99608 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.79■□□□□ 0.12
NDNQ99608 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.79■□□□□ 0.12
NDNQ99608 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
NDNQ99608 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NDNQ99608 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.79■□□□□ 0.12
NDNQ99608 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.79■□□□□ 0.12
NDNQ99608 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.79■□□□□ 0.12
NDNQ99608 AC023157.3-201ENST00000619086 2088 ntBASIC15.79■□□□□ 0.12
NDNQ99608 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDNQ99608 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NDNQ99608 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NDNQ99608 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.78■□□□□ 0.12
NDNQ99608 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.78■□□□□ 0.12
NDNQ99608 AC127383.1-201ENST00000444697 1800 ntBASIC15.78■□□□□ 0.12
NDNQ99608 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.78■□□□□ 0.12
NDNQ99608 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
NDNQ99608 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NDNQ99608 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NDNQ99608 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.78■□□□□ 0.12
NDNQ99608 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.78■□□□□ 0.12
NDNQ99608 AL353705.2-201ENST00000428243 662 ntBASIC15.78■□□□□ 0.12
NDNQ99608 PHKG1P2-201ENST00000457537 863 ntBASIC15.78■□□□□ 0.12
NDNQ99608 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.78■□□□□ 0.12
NDNQ99608 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.78■□□□□ 0.12
NDNQ99608 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.78■□□□□ 0.12
NDNQ99608 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 AC003101.2-201ENST00000612557 442 ntBASIC15.78■□□□□ 0.12
NDNQ99608 AC018529.1-201ENST00000613063 361 ntBASIC15.78■□□□□ 0.12
NDNQ99608 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDNQ99608 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms