Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 FNTAP2-201ENST00000430308 634 ntBASIC20.38■□□□□ 0.85
NBPF4Q96M43 BX284668.4-201ENST00000453917 508 ntBASIC20.38■□□□□ 0.85
NBPF4Q96M43 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 AC024909.3-201ENST00000611513 2257 ntBASIC20.38■□□□□ 0.85
NBPF4Q96M43 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBPF4Q96M43 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.38■□□□□ 0.85
NBPF4Q96M43 LRRC59-203ENST00000576448 1531 ntBASIC20.37■□□□□ 0.85
NBPF4Q96M43 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 AC127383.1-201ENST00000444697 1800 ntBASIC20.37■□□□□ 0.85
NBPF4Q96M43 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 HIST2H2BC-201ENST00000498492 580 ntBASIC20.37■□□□□ 0.85
NBPF4Q96M43 AC004066.1-201ENST00000502488 802 ntBASIC20.37■□□□□ 0.85
NBPF4Q96M43 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 AC244452.3-201ENST00000636814 210 ntBASIC20.37■□□□□ 0.85
NBPF4Q96M43 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.37■□□□□ 0.85
NBPF4Q96M43 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBPF4Q96M43 AC138028.6-201ENST00000616106 1482 ntBASIC20.37■□□□□ 0.85
NBPF4Q96M43 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NBPF4Q96M43 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NBPF4Q96M43 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NBPF4Q96M43 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NBPF4Q96M43 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NBPF4Q96M43 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NBPF4Q96M43 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NBPF4Q96M43 AL645937.2-201ENST00000396808 931 ntBASIC20.36■□□□□ 0.85
NBPF4Q96M43 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 SLC25A24P2-201ENST00000415059 510 ntBASIC20.36■□□□□ 0.85
NBPF4Q96M43 POM121L8P-201ENST00000417732 1281 ntBASIC20.36■□□□□ 0.85
NBPF4Q96M43 POM121L9P-203ENST00000441984 1285 ntBASIC20.36■□□□□ 0.85
NBPF4Q96M43 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NBPF4Q96M43 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NBPF4Q96M43 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 AC091804.1-201ENST00000486888 567 ntBASIC20.36■□□□□ 0.85
NBPF4Q96M43 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 RNA5SP423-201ENST00000517127 109 ntBASIC20.36■□□□□ 0.85
NBPF4Q96M43 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.36■□□□□ 0.85
NBPF4Q96M43 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms