Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 AL671277.1-201ENST00000429656 993 ntBASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 HLA-J-203ENST00000494367 1087 ntBASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CHAMP1Q96JM3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHAMP1Q96JM3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHAMP1Q96JM3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 MTHFR-210ENST00000641407 2387 ntBASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 INTS4P1-203ENST00000641008 3683 ntBASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 ZNF259P1-201ENST00000407656 1365 ntBASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 REXO1L2P-201ENST00000425429 2069 ntBASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 AP000842.3-202ENST00000569238 1080 ntBASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 AP001160.2-201ENST00000596071 487 ntBASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 ACE3P-201ENST00000423435 1973 ntBASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHAMP1Q96JM3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 AC112191.1-201ENST00000523689 701 ntBASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 AC008267.7-201ENST00000624570 1194 ntBASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHAMP1Q96JM3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms