Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
RPGRQ92834 ELK2AP-201ENST00000392510 1007 ntBASIC19.13■□□□□ 0.65
RPGRQ92834 MIR663B-201ENST00000408361 115 ntBASIC19.13■□□□□ 0.65
RPGRQ92834 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.13■□□□□ 0.65
RPGRQ92834 BX284668.4-201ENST00000453917 508 ntBASIC19.13■□□□□ 0.65
RPGRQ92834 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.13■□□□□ 0.65
RPGRQ92834 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.13■□□□□ 0.65
RPGRQ92834 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.13■□□□□ 0.65
RPGRQ92834 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.13■□□□□ 0.65
RPGRQ92834 ENPP7P14-201ENST00000621765 1040 ntBASIC19.13■□□□□ 0.65
RPGRQ92834 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RPGRQ92834 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RPGRQ92834 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RPGRQ92834 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.13■□□□□ 0.65
RPGRQ92834 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.13■□□□□ 0.65
RPGRQ92834 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPGRQ92834 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.13■□□□□ 0.65
RPGRQ92834 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPGRQ92834 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.12■□□□□ 0.65
RPGRQ92834 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RPGRQ92834 AC018735.1-201ENST00000437208 1502 ntBASIC19.12■□□□□ 0.65
RPGRQ92834 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.12■□□□□ 0.65
RPGRQ92834 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPGRQ92834 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RPGRQ92834 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.12■□□□□ 0.65
RPGRQ92834 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.12■□□□□ 0.65
RPGRQ92834 HIST2H2BC-201ENST00000498492 580 ntBASIC19.12■□□□□ 0.65
RPGRQ92834 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RPGRQ92834 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.12■□□□□ 0.65
RPGRQ92834 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.12■□□□□ 0.65
RPGRQ92834 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.12■□□□□ 0.65
RPGRQ92834 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPGRQ92834 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.12■□□□□ 0.65
RPGRQ92834 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.12■□□□□ 0.65
RPGRQ92834 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RPGRQ92834 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPGRQ92834 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.12■□□□□ 0.65
RPGRQ92834 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.12■□□□□ 0.65
RPGRQ92834 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.12■□□□□ 0.65
RPGRQ92834 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPGRQ92834 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RPGRQ92834 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.11■□□□□ 0.65
RPGRQ92834 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.11■□□□□ 0.65
RPGRQ92834 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
RPGRQ92834 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 AL023775.1-201ENST00000454907 1746 ntBASIC19.11■□□□□ 0.65
RPGRQ92834 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RPGRQ92834 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RPGRQ92834 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
RPGRQ92834 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RPGRQ92834 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.11■□□□□ 0.65
RPGRQ92834 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.11■□□□□ 0.65
RPGRQ92834 POM121L10P-201ENST00000436994 1285 ntBASIC19.11■□□□□ 0.65
RPGRQ92834 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.11■□□□□ 0.65
RPGRQ92834 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPGRQ92834 HSPB1P2-201ENST00000448722 546 ntBASIC19.11■□□□□ 0.65
RPGRQ92834 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.11■□□□□ 0.65
RPGRQ92834 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
RPGRQ92834 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.11■□□□□ 0.65
RPGRQ92834 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.11■□□□□ 0.65
RPGRQ92834 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms