Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 AHCYP2-201ENST00000430630 1300 ntBASIC14.49□□□□□ -0.09
CT55Q8WUE5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 MIR1202-201ENST00000408529 83 ntBASIC14.49□□□□□ -0.09
CT55Q8WUE5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 RNA5SP486-201ENST00000515961 83 ntBASIC14.49□□□□□ -0.09
CT55Q8WUE5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.49□□□□□ -0.09
CT55Q8WUE5 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 PCDH8P1-201ENST00000428983 2773 ntBASIC14.49□□□□□ -0.09
CT55Q8WUE5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
CT55Q8WUE5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CT55Q8WUE5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 ACTBP8-201ENST00000403258 1108 ntBASIC14.48□□□□□ -0.09
CT55Q8WUE5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 AC114812.1-204ENST00000449669 728 ntBASIC14.48□□□□□ -0.09
CT55Q8WUE5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 MIR4741-201ENST00000579822 90 ntBASIC14.48□□□□□ -0.09
CT55Q8WUE5 AC103810.3-201ENST00000583567 96 ntBASIC14.48□□□□□ -0.09
CT55Q8WUE5 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.48□□□□□ -0.09
CT55Q8WUE5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CT55Q8WUE5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms