Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC011447.5-201ENST00000616168 564 ntBASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 SOCS2P1-201ENST00000417727 557 ntBASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 RPL13AP25-201ENST00000484130 612 ntBASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 ENPP7P5-201ENST00000541031 1031 ntBASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 AP002414.2-201ENST00000591780 3365 ntBASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHKBP1Q8TBC3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 C1QBPP1-201ENST00000400117 770 ntBASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 BCRP2-202ENST00000447763 634 ntBASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 CTBP2P5-201ENST00000454986 1264 ntBASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 AC022494.1-201ENST00000466044 728 ntBASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 AC092658.1-201ENST00000505836 891 ntBASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 BCRP6-201ENST00000510112 632 ntBASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 BCRP7-201ENST00000511549 544 ntBASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms